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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4630791 chr2:101085556 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.81 3.02E-11 Box Plot
THCA rs4631 chr5:176733116 A/G LOC388955 chr2:63849182-63850159:- 0.88 20.07 2.04E-65 Box Plot
THCA rs4631209 chr5:120167701 G/C PBX3 chr9:128509624-128729656:+ 0.26 6.16 1.58E-9 Box Plot
THCA rs4631423 chr8:11699279 C/T SGK223 chr8:8175258-8244008:- -0.39 -6.25 8.88E-10 Box Plot
THCA rs4631424 chr8:11236809 T/C SGK223 chr8:8175258-8244008:- 0.47 9.24 7.87E-19 Box Plot
THCA rs4631425 chr8:11239054 C/T SGK223 chr8:8175258-8244008:- 0.45 8.91 1.1E-17 Box Plot
THCA rs4632181 chr17:18202678 G/A LOC162632 chr17:16614993-16707819:+ 0.37 5.97 4.64E-9 Box Plot
THCA rs4632365 chr2:101085668 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs4633941 chr2:101085869 T/A LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs4634439 chr6:26598004 C/T ZFP57 chr6:29640169-29648887:- -0.54 -6.13 1.85E-9 Box Plot
THCA rs4634600 chr8:11239017 T/A SGK223 chr8:8175258-8244008:- 0.45 8.91 1.1E-17 Box Plot
THCA rs4639824 chr1:211183073 A/C CPNE6 chr14:24540046-24547309:+ 0.32 5.88 7.64E-9 Box Plot
THCA rs4642600 chr8:11013025 C/A SGK223 chr8:8175258-8244008:- 0.44 7.89 2.13E-14 Box Plot
THCA rs4643959 chr5:49687465 T/A LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.43E-14 Box Plot
THCA rs4646578 chr15:58329927 A/G ARID3A chr19:925781-975939:+ -0.57 -6.2 1.24E-9 Box Plot